HTLV1 Target gene Detail Information

> LAMA2 Gene Search Result


Gene Information
Gene Name LAMA2
Gene ID 3908
Gene Full Name laminin subunit alpha 2
Gene Alias LAMM; MDC1A
Transcripts ENSG00000196569
Virus HTLV1
Gene Type protein coding
HPA Location Info
HPA Protein Class Info Disease related genes, Plasma proteins, Predicted intracellular proteins, Predicted secreted proteins
Uniport_ID P24043
HGNC ID HGNC:6482
VEGA ID OTTHUMG00000015545
OMIM ID 156225
String ID 9606.ENSP00000400365
PharmGKB ID PA30271
Target gene [LAMA2] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6006961 chr6 57 4 61 View
6009910 chr6 2 31 1 34 View
6018629 chr6 6 3 9 View
6027761 chr6 1 1 2 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).