HBV Target gene Detail Information

> KRTAP5-5 Gene Search Result


Gene Information
Gene Name KRTAP5-5
Gene ID 439915
Gene Full Name keratin associated protein 5-5
Gene Alias KRTAP5.5; KRTAP5-11
Transcripts ENSG00000277291
Virus HBV
Gene Type protein coding
HPA Location Info
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q701N2
HGNC ID HGNC:23601
VEGA ID OTTHUMG00000190086
String ID 9606.ENSP00000382584
PharmGKB ID PA134889326
Target gene [KRTAP5-5] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1400078 chr11 3 3 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of KRTAP5-5 expression and immune infiltrating cell level correlation result in HBV+ samples
KRTAP5-5 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).