HBV Target gene Detail Information

> KLRG2 Gene Search Result


Gene Information
Gene Name KLRG2
Gene ID 346689
Gene Full Name killer cell lectin like receptor G2
Gene Alias CLEC15B
Transcripts ENSG00000188883
Virus HBV
Gene Type protein coding
HPA Location Info Nucleoplasm;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID A4D1S0
HGNC ID HGNC:24778
VEGA ID OTTHUMG00000157705
String ID 9606.ENSP00000339356
PharmGKB ID PA162393624
Target gene [KLRG2] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1003341 chr7 84 46 13 143 View
1015055 chr7 3 3 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of KLRG2 expression and immune infiltrating cell level correlation result in HBV+ samples
KLRG2 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).