HBV Target gene Detail Information

> KLHL30 Gene Search Result


Gene Information
Gene Name KLHL30
Gene ID 377007
Gene Full Name kelch like family member 30
Transcripts ENSG00000168427
Virus HBV
Gene Type protein coding
HPA Location Info Centriolar satellite;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q0D2K2
HGNC ID HGNC:24770
VEGA ID OTTHUMG00000152905
String ID 9606.ENSP00000386389
PharmGKB ID PA162393522
Target gene [KLHL30] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1006131 chr2 41 2 43 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of KLHL30 expression and immune infiltrating cell level correlation result in HBV+ samples
KLHL30 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).