HIV Target gene Detail Information

> KLHL17 Gene Search Result


Gene Information
Gene Name KLHL17
Gene ID 339451
Gene Full Name kelch like family member 17
Transcripts ENSG00000187961
Virus HIV
Gene Type protein coding
HPA Location Info Nuclear bodies;Nucleoplasm;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q6TDP4
HGNC ID HGNC:24023
VEGA ID OTTHUMG00000040721
OMIM ID 619262
String ID 9606.ENSP00000343930
PharmGKB ID PA134887396
Target gene [KLHL17] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4002287 chr1 93 8 101 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE17372 (GEO) AIDS-associated lymphoma 17 AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372

HeatMap of cell type fractions in all samples Lollipop of KLHL17 expression and immune infiltrating cell level correlation result in HIV+ samples
KLHL17 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).