HBV Target gene Detail Information

> KDR Gene Search Result


Gene Information
Gene Name KDR
Gene ID 3791
Gene Full Name kinase insert domain receptor
Gene Alias FLK1; CD309; VEGFR; VEGFR2
Transcripts ENSG00000128052
Virus HBV
Gene Type protein coding
HPA Location Info Plasma membrane;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Cancer-related genes, CD markers, Disease related genes, Enzymes, FDA approved drug targets, Plasma proteins, Predicted membrane proteins, RAS pathway related proteins
Uniport_ID P35968
HGNC ID HGNC:6307
VEGA ID OTTHUMG00000128734
OMIM ID 191306
String ID 9606.ENSP00000263923
Drugbank ID BE0000369
Drug (Cytoscape Annotation) Regorafenib;Sunitinib Malate;Ramucirumab;Lenvatinib Mesylate;Sorafenib Tosylate;Ponatinib Hydrochloride;ErlotinibHydrochloride;Axitinib;Vandetanib;Pazopanib Hydrochloride
PharmGKB ID PA30086
FDA Approved Drug Lenvatinib;Ponatinib;Ramucirumab;Sorafenib;Pazopanib;Vandetanib;Sunitinib;Regorafenib;Cabozantinib;Midostaurin;Axitinib
Target gene [KDR] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1013654 chr4 3 1 4 View
1013892 chr4 4 4 View
1016647 chr4 1 1 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of KDR expression and immune infiltrating cell level correlation result in HBV+ samples
KDR expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).