HBV Target gene Detail Information

> KDM6A Gene Search Result


Gene Information
Gene Name KDM6A
Gene ID 7403
Gene Full Name lysine demethylase 6A
Gene Alias UTX; KABUK2; bA386N14.2
Transcripts ENSG00000147050
Virus HBV
Gene Type protein coding
HPA Location Info Nucleoli;Nucleoli rim;Nucleoplasm;
HPA Protein Class Info Cancer-related genes, Disease related genes, Predicted intracellular proteins
Gene Function Suppressor gene
Uniport_ID O15550
HGNC ID HGNC:12637
VEGA ID OTTHUMG00000021402
OMIM ID 300128
String ID 9606.ENSP00000367203
PharmGKB ID PA37262
Target gene [KDM6A] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1010503 chrX 12 12 View
1400004 chrX 1 1 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of KDM6A expression and immune infiltrating cell level correlation result in HBV+ samples
KDM6A expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).