HTLV1 Target gene Detail Information

> KDM5D Gene Search Result


Gene Information
Gene Name KDM5D
Gene ID 8284
Gene Full Name lysine demethylase 5D
Gene Alias HY; HYA; SMCY; JARID1D
Transcripts ENSG00000012817
Virus HTLV1
Gene Type protein coding
HPA Location Info Nucleoli fibrillar center;
HPA Protein Class Info Plasma proteins, Predicted intracellular proteins, Transcription factors
Uniport_ID Q9BY66
HGNC ID HGNC:11115
VEGA ID OTTHUMG00000036508
OMIM ID 426000
Drugbank ID BE0002215
PharmGKB ID PA35965
Target gene [KDM5D] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6022983 chrY 4 4 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE55851 (GEO) Adult T-cell leukemia 21 Normal (3), Asymptomatic carriers (HTLV1+)(6), Adult T-cell Leukemia-lymphoma (HTLV1+)(12)

> Dataset: GSE55851

HeatMap of cell type fractions in all samples Lollipop of KDM5D expression and immune infiltrating cell level correlation result in HTLV1+ samples
KDM5D expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).