HIV Target gene Detail Information

> KDM5A Gene Search Result


Gene Information
Gene Name KDM5A
Gene ID 5927
Gene Full Name lysine demethylase 5A
Gene Alias RBP2; RBBP2; RBBP-2
Transcripts ENSG00000073614
Virus HIV
Gene Type protein coding
HPA Location Info Nuclear bodies;Cytosol;
HPA Protein Class Info Cancer-related genes, Predicted intracellular proteins, Transcription factors
Gene Function Suppressor gene
Uniport_ID P29375
HGNC ID HGNC:9886
VEGA ID OTTHUMG00000168055
OMIM ID 180202
String ID 9606.ENSP00000382688
PharmGKB ID PA34250
Target gene [KDM5A] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4005160 chr12 27 8 35 View
4009730 chr12 11 11 View
4009898 chr12 8 2 10 View
4013847 chr12 1 2 3 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).