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HBV Target gene Detail Information

> KDELR2 Gene Search Result


Gene Information
Gene Name KDELR2
Gene ID 11014
Gene Full Name KDEL endoplasmic reticulum protein retention receptor 2
Gene Alias ELP-1; ERD2.2
Transcripts ENSG00000136240
Virus HBV
Gene Type protein coding
HPA Location Info
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted membrane proteins
Uniport_ID P33947
HGNC ID HGNC:6305
VEGA ID OTTHUMG00000023103
OMIM ID 609024
String ID 9606.ENSP00000258739
PharmGKB ID PA30084
Target gene [KDELR2] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1011280 chr7 7 2 9 View
1402567 chr7 7 2 9 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE114783 (GEO) Chronic HBV (CHB) infection 36 Chronic hepatitis B patients (HBV+)(10),Hepatocellular carcinoma (HBV+)(10),Liver cirrhosis(HBV+)(10),Normal(3),HBV carriers (3)
GSE114783 (GEO) Hepatocellular carcinoma 36 Chronic hepatitis B patients (HBV+)(10),Hepatocellular carcinoma (HBV+)(10),Liver cirrhosis(HBV+)(10),Normal(3),HBV carriers (3)
GSE114783 (GEO) Liver cirrhosis 36 Chronic hepatitis B patients (HBV+)(10),Hepatocellular carcinoma (HBV+)(10),Liver cirrhosis(HBV+)(10),Normal(3),HBV carriers (3)
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: GSE114783

HeatMap of cell type fractions in all samples Lollipop of KDELR2 expression and immune infiltrating cell level correlation result in HBV+ Chronic HBV (CHB) infection samples
KDELR2 expression: Low -> High
Lollipop of KDELR2 expression and immune infiltrating cell level correlation result in HBV+ Liver cirrhosis samples Lollipop of KDELR2 expression and immune infiltrating cell level correlation result in HBV+ Hepatocellular carcinoma samples

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of KDELR2 expression and immune infiltrating cell level correlation result in HBV+ samples
KDELR2 expression: Low -> High
Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).