HIV Target gene Detail Information

> KCTD13 Gene Search Result

Gene Information

Gene Name	KCTD13
Gene ID	253980
Gene Full Name	potassium channel tetramerization domain containing 13
Gene Alias	PDIP1; FKSG86; BACURD1; POLDIP1; hBACURD1
Transcripts	ENSG00000174943
Virus	HIV
Gene Type	protein coding
HPA Location Info	Nuclear bodies;Nucleoplasm;
HPA Protein Class Info	Disease related genes, Predicted intracellular proteins
Uniport_ID	Q8WZ19
HGNC ID	HGNC:22234
VEGA ID	OTTHUMG00000132120
OMIM ID	608947
String ID	9606.ENSP00000455785
PharmGKB ID	PA134907908

Target gene [KCTD13] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4002132	chr16	73	7	31	111	View
4004557	chr16	40	2		42	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of KCTD13 expression and immune infiltrating cell level correlation result in HIV+ samples
KCTD13 expression: Low -> High

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of KCTD13 expression and immune infiltrating cell level correlation result in HIV+ samples
KCTD13 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).