HBV Target gene Detail Information

> KCNJ3 Gene Search Result


Gene Information
Gene Name KCNJ3
Gene ID 3760
Gene Full Name potassium voltage-gated channel subfamily J member 3
Gene Alias KGA; GIRK1; KIR3.1
Transcripts ENSG00000162989
Virus HBV
Gene Type protein coding
HPA Location Info
Membrane Info Predicted membrane proteins
HPA Protein Class Info Plasma proteins, Predicted membrane proteins, Transporters, Voltage-gated ion channels
Uniport_ID P48549
HGNC ID HGNC:6264
VEGA ID OTTHUMG00000131937
OMIM ID 601534
String ID 9606.ENSP00000295101
Drugbank ID BE0001028
PharmGKB ID PA215
Target gene [KCNJ3] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1002328 chr2 32 237 24 293 View
1002340 chr2 33 233 24 290 View
1400539 chr2 41 1 3 45 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of KCNJ3 expression and immune infiltrating cell level correlation result in HBV+ samples
KCNJ3 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).