HBV Target gene Detail Information

> KCNH5 Gene Search Result


Gene Information
Gene Name KCNH5
Gene ID 27133
Gene Full Name potassium voltage-gated channel subfamily H member 5
Gene Alias EAG2; hEAG2; H-EAG2; Kv10.2
Transcripts ENSG00000140015
Virus HBV
Gene Type protein coding
HPA Location Info Centrosome;Cytosol;Nucleoplasm;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted membrane proteins, Voltage-gated ion channels
Uniport_ID Q8NCM2
HGNC ID HGNC:6254
VEGA ID OTTHUMG00000029041
OMIM ID 605716
String ID 9606.ENSP00000321427
Drugbank ID BE0010041; BE0009847
PharmGKB ID PA30040
Target gene [KCNH5] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1007381 chr14 26 2 28 View
1011083 chr14 9 1 10 View
1017626 chr14 0 View
1401683 chr14 0 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of KCNH5 expression and immune infiltrating cell level correlation result in HBV+ samples
KCNH5 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).