HIV Target gene Detail Information

> KCNC4 Gene Search Result

Gene Information

Gene Name	KCNC4
Gene ID	3749
Gene Full Name	potassium voltage-gated channel subfamily C member 4
Gene Alias	KV3.4; C1orf30; KSHIIIC; HKSHIIIC
Transcripts	ENSG00000116396
Virus	HIV
Gene Type	protein coding
HPA Location Info	Cytosol;Nucleoli;
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Predicted intracellular proteins, Predicted membrane proteins, Voltage-gated ion channels
Uniport_ID	Q03721
HGNC ID	HGNC:6236
VEGA ID	OTTHUMG00000011037
OMIM ID	176265
String ID	9606.ENSP00000358802
Drugbank ID	BE0003319; BE0009847
PharmGKB ID	PA30028

Target gene [KCNC4] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4000414	chr1	11	426	45	482	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of KCNC4 expression and immune infiltrating cell level correlation result in HIV+ samples
KCNC4 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).