HIV Target gene Detail Information

> JMY Gene Search Result

Gene Information

Gene Name	JMY
Gene ID	133746
Gene Full Name	junction mediating and regulatory protein, p53 cofactor
Gene Alias	WHAMM2; WHDC1L3
Transcripts	ENSG00000152409
Virus	HIV
Gene Type	protein coding
HPA Location Info	Nucleoplasm;
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	Q8N9B5
HGNC ID	HGNC:28916
VEGA ID	OTTHUMG00000131301
OMIM ID	604279
String ID	9606.ENSP00000379441
PharmGKB ID	PA164721124

Target gene [JMY] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4000157	chr5	439	176	245	860	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of JMY expression and immune infiltrating cell level correlation result in HIV+ samples
JMY expression: Low -> High

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of JMY expression and immune infiltrating cell level correlation result in HIV+ samples
JMY expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).