HIV Target gene Detail Information

> JMJD8 Gene Search Result

Gene Information

Gene Name	JMJD8
Gene ID	339123
Gene Full Name	jumonji domain containing 8
Gene Alias	PP14397; C16orf20
Transcripts	ENSG00000161999
Virus	HIV
Gene Type	protein coding
HPA Location Info
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	Q96S16
HGNC ID	HGNC:14148
VEGA ID	OTTHUMG00000172950
String ID	9606.ENSP00000399475
PharmGKB ID	PA162392531

Target gene [JMJD8] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4000665	chr16	305	21		326	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of JMJD8 expression and immune infiltrating cell level correlation result in HIV+ samples
JMJD8 expression: Low -> High

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of JMJD8 expression and immune infiltrating cell level correlation result in HIV+ samples
JMJD8 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).