HTLV1 Target gene Detail Information

> JARID2 Gene Search Result


Gene Information
Gene Name JARID2
Gene ID 3720
Gene Full Name jumonji and AT-rich interaction domain containing 2
Gene Alias JMJ
Transcripts ENSG00000008083
Virus HTLV1
Gene Type protein coding
HPA Location Info Mitochondria;Nucleoplasm;
HPA Protein Class Info Plasma proteins, Predicted intracellular proteins, Transcription factors
Uniport_ID Q92833
HGNC ID HGNC:6196
VEGA ID OTTHUMG00000014293
OMIM ID 601594
String ID 9606.ENSP00000341280
PharmGKB ID PA29995
Target gene [JARID2] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6007766 chr6 3 24 25 52 View
6019357 chr6 5 2 1 8 View
6020328 chr6 2 5 7 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).