HBV Target gene Detail Information

> JAKMIP1 Gene Search Result


Gene Information
Gene Name JAKMIP1
Gene ID 152789
Gene Full Name janus kinase and microtubule interacting protein 1
Gene Alias JAMIP1; MARLIN1; Gababrbp
Transcripts ENSG00000152969
Virus HBV
Gene Type protein coding
HPA Location Info
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID Q96N16
HGNC ID HGNC:26460
VEGA ID OTTHUMG00000125491
OMIM ID 611195
String ID 9606.ENSP00000386711
PharmGKB ID PA143485508
Target gene [JAKMIP1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1002776 chr4 165 35 5 205 View
1401795 chr4 165 35 5 205 View
1404128 chr4 22 6 1 29 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of JAKMIP1 expression and immune infiltrating cell level correlation result in HBV+ samples
JAKMIP1 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).