HPV Target gene Detail Information

> JAK3 Gene Search Result


Gene Information
Gene Name JAK3
Gene ID 3718
Gene Full Name Janus kinase 3
Gene Alias JAKL; LJAK; JAK-3; L-JAK; JAK3_HUMAN
Transcripts ENSG00000105639
Virus HPV
Gene Type protein coding
HPA Location Info Cytosol;Plasma membrane;
HPA Protein Class Info Cancer-related genes, Disease related genes, Enzymes, FDA approved drug targets, Predicted intracellular proteins
Uniport_ID P52333
HGNC ID HGNC:6193
VEGA ID OTTHUMG00000165648
OMIM ID 600173
String ID 9606.ENSP00000391676
Drugbank ID BE0003493
PharmGKB ID PA29990
Target gene [JAK3] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5300089 chr19 8 2 10 View
5300090 chr19 8 2 10 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE40774 (GEO) Head and neck squamous cell carcinoma 134 Head and neck Squamous cell carcinomas GLOTTIC LARYNX (EBV-)(2), Head and neck Squamous cell carcinomas HYPOPHARYNX (EBV-)(9), Head and neck Squamous cell carcinomas ORAL CAVITY (EBV-)(23), Head and neck Squamous cell carcinomas ORAL CAVITY (EBV+)(2), Head and neck Squamous cell carcinomas OROPHARYNX (EBV-)(22), Head and neck Squamous cell carcinomas OROPHARYNX (EBV+)(54), Head and neck Squamous cell carcinomas OTHER (EBV+)(1), Head and neck Squamous cell carcinomas SUBGLOTTIC LARYNX (EBV-)(1), Head and neck Squamous cell carcinomas SUPRAGLOTTIC (EBV-)(19), Squamous cell carcinomas SUPRAGLOTTIC (EBV+)(1)
GSE138080 (GEO) Cervical intraepithelial neoplasia 25 Normal (10), Cervical intraepithelial neoplasia (HPV+)(15)
HNSC (TCGA) Head and Neck squamous cell carcinoma 566 Head and Neck squamous cell carcinoma(HPV-)(483),Head and Neck squamous cell carcinoma(HPV+)(39),Paracancerous(HPV-)(44)

> Dataset: GSE40774

HeatMap of cell type fractions in all samples Lollipop of JAK3 expression and immune infiltrating cell level correlation result in HPV+ samples
JAK3 expression: Low -> High

> Dataset: GSE138080

HeatMap of cell type fractions in all samples Lollipop of JAK3 expression and immune infiltrating cell level correlation result in HPV+ samples
JAK3 expression: Low -> High

> Dataset: HNSC

HeatMap of cell type fractions in all samples Lollipop of JAK3 expression and immune infiltrating cell level correlation result in HPV+ samples
JAK3 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).