HTLV1 Target gene Detail Information

> JADE1 Gene Search Result


Gene Information
Gene Name JADE1
Gene ID 79960
Gene Full Name jade family PHD finger 1
Gene Alias PHF17
Transcripts ENSG00000077684
Virus HTLV1
Gene Type protein coding
HPA Location Info Mitochondria;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q6IE81
HGNC ID HGNC:30027
VEGA ID OTTHUMG00000161176
OMIM ID 610514
String ID 9606.ENSP00000226319
PharmGKB ID PA134925124
Target gene [JADE1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6002823 chr4 117 50 40 207 View
6010243 chr4 32 32 View
6011739 chr4 18 1 6 25 View
6016279 chr4 6 5 1 12 View
6025407 chr4 2 1 3 View
6025408 chr4 2 1 3 View
6026178 chr4 2 2 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).