HIV Target gene Detail Information

> ITGB1 Gene Search Result


Gene Information
Gene Name ITGB1
Gene ID 3688
Gene Full Name integrin subunit beta 1
Gene Alias CD29; FNRB; MDF2; VLAB; GPIIA; MSK12; VLA-BETA
Transcripts ENSG00000150093
Virus HIV
Gene Type protein coding
HPA Location Info Focal adhesion sites;Plasma membrane;Endoplasmic reticulum;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Cancer-related genes, CD markers, FDA approved drug targets, Plasma proteins, Predicted intracellular proteins, Predicted membrane proteins, Transporters
Gene Function Suppressor gene
Uniport_ID P05556
HGNC ID HGNC:6153
VEGA ID OTTHUMG00000017928
OMIM ID 135630
String ID 9606.ENSP00000379350
Drugbank ID BE0003575
PharmGKB ID PA29953
Target gene [ITGB1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4001565 chr10 48 80 22 150 View
4003176 chr10 8 57 2 67 View
4007390 chr10 14 5 19 View
4008217 chr10 9 7 16 View
4008322 chr10 5 9 1 15 View
4012851 chr10 3 1 4 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).