HBV Target gene Detail Information

> ITGAV Gene Search Result


Gene Information
Gene Name ITGAV
Gene ID 3685
Gene Full Name integrin subunit alpha V
Gene Alias CD51; MSK8; VNRA; VTNR
Transcripts ENSG00000138448
Virus HBV
Gene Type protein coding
HPA Location Info Cytosol;Focal adhesion sites;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Cancer-related genes, CD markers, FDA approved drug targets, Predicted intracellular proteins, Predicted membrane proteins, Transporters
Gene Function Suppressor gene
Uniport_ID P06756
HGNC ID HGNC:6150
VEGA ID OTTHUMG00000132635
OMIM ID 193210
String ID 9606.ENSP00000261023
Drugbank ID BE0003576
PharmGKB ID PA37336
Target gene [ITGAV] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1008326 chr2 17 4 21 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of ITGAV expression and immune infiltrating cell level correlation result in HBV+ samples
ITGAV expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).