HTLV1 Target gene Detail Information

> ITGA9 Gene Search Result


Gene Information
Gene Name ITGA9
Gene ID 3680
Gene Full Name integrin subunit alpha 9
Gene Alias RLC; ITGA4L; ALPHA-RLC
Transcripts ENSG00000144668
Virus HTLV1
Gene Type protein coding
HPA Location Info Vesicles;Cell Junctions;Nucleoplasm;Plasma membrane;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID Q13797
HGNC ID HGNC:6145
VEGA ID OTTHUMG00000130815
OMIM ID 603963
String ID 9606.ENSP00000264741
PharmGKB ID PA29945
Target gene [ITGA9] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6006458 chr3 55 5 8 68 View
6014331 chr3 16 1 17 View
6015067 chr3 11 4 15 View
6025276 chr3 3 3 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).