HBV Target gene Detail Information

> IQCA1 Gene Search Result


Gene Information
Gene Name IQCA1
Gene ID 79781
Gene Full Name IQ motif containing with AAA domain 1
Gene Alias IQCA; DRC11; 4930465P12Rik
Transcripts ENSG00000132321
Virus HBV
Gene Type protein coding
HPA Location Info Nucleoplasm;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q86XH1
HGNC ID HGNC:26195
VEGA ID OTTHUMG00000153058
String ID 9606.ENSP00000407213
PharmGKB ID PA162392257
Target gene [IQCA1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1004514 chr2 56 10 13 79 View
1010238 chr2 13 13 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of IQCA1 expression and immune infiltrating cell level correlation result in HBV+ samples
IQCA1 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).