HBV Target gene Detail Information

> INO80C Gene Search Result


Gene Information
Gene Name INO80C
Gene ID 125476
Gene Full Name INO80 complex subunit C
Gene Alias IES6; hIes6; C18orf37
Transcripts ENSG00000153391
Virus HBV
Gene Type protein coding
HPA Location Info Nucleoli fibrillar center;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID Q6PI98
HGNC ID HGNC:26994
VEGA ID OTTHUMG00000132564
String ID 9606.ENSP00000391457
PharmGKB ID PA162392132
Target gene [INO80C] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1011194 chr18 8 2 10 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of INO80C expression and immune infiltrating cell level correlation result in HBV+ samples
INO80C expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).