HIV Target gene Detail Information

> ILF3 Gene Search Result

Gene Information

Gene Name	ILF3
Gene ID	3609
Gene Full Name	interleukin enhancer binding factor 3
Gene Alias	CBTF; DRBF; MMP4; MPP4; NF90; NFAR; NF110; NF90a; NF90b; NFAR2; TCP80; DRBP76; NF110b; NFAR-1; TCP110; MPHOSPH4; NF-AT-90
Transcripts	ENSG00000129351
Virus	HIV
Gene Type	protein coding
HPA Location Info	Mitochondria;Nucleoli;Nucleoplasm;
HPA Protein Class Info	Cancer-related genes, Plasma proteins, Predicted intracellular proteins
Uniport_ID	Q12906
HGNC ID	HGNC:6038
VEGA ID	OTTHUMG00000180587
OMIM ID	603182
String ID	9606.ENSP00000404121
PharmGKB ID	PA29853

Target gene [ILF3] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4001448	chr19	99	13	51	163	View
4001532	chr19	128	30	5	163	View
4001780	chr19	120	12		132	View
4004200	chr19	42	6		48	View
4005110	chr19	29	7		36	View
4007616	chr19	16		2	18	View
4008112	chr19	15	1		16	View
4008347	chr19	15			15	View
4009622	chr19	11			11	View
4012272	chr19	5			5	View
4015318	chr19		1		1	View
4015525	chr19		1		1	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of ILF3 expression and immune infiltrating cell level correlation result in HIV+ samples
ILF3 expression: Low -> High

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of ILF3 expression and immune infiltrating cell level correlation result in HIV+ samples
ILF3 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).