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HPV Target gene Detail Information

> IL17B Gene Search Result


Gene Information
Gene Name IL17B
Gene ID 27190
Gene Full Name interleukin 17B
Gene Alias NIRF; IL-20; IL-17B; ZCYTO7
Transcripts ENSG00000127743
Virus HPV
Gene Type protein coding
HPA Location Info
HPA Protein Class Info Cancer-related genes, Predicted secreted proteins
Uniport_ID Q9UHF5
HGNC ID HGNC:5982
VEGA ID OTTHUMG00000130051
OMIM ID 604627
String ID 9606.ENSP00000261796
PharmGKB ID PA29795
Target gene [IL17B] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5001581 chr5 27 1 28 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE140662 (GEO) Condyloma Acuminatum 8 Condyloma acuminata (HPV+)(5), Skin(3)
GSE55546 (GEO) Oropharyngeal squamous cell carcinoma 16 Oropharyngeal cancers (HPV+)(12), Normal (4)
GSE55544 (GEO) Oropharyngeal squamous cell carcinoma 23 Oropharyngeal cancers HPV Active (11), Oropharyngeal cancers HPV Inactive (4), Oropharyngeal cancers HPV Negative (8)
GSE55542 (GEO) Oropharyngeal squamous cell carcinoma 36 Oropharyngeal cancers HPV Active (12), Oropharyngeal cancers HPV Inactive (8), Oropharyngeal cancers HPV Negative (16)
GSE51993 (GEO) Cervical intraepithelial neoplasia 24 Cervical intraepithelial neoplasia (HPV+)(17), Normal(7)
HNSC (TCGA) Head and Neck squamous cell carcinoma 566 Head and Neck squamous cell carcinoma(HPV-)(483),Head and Neck squamous cell carcinoma(HPV+)(39),Paracancerous(HPV-)(44)

> Dataset: GSE140662

HeatMap of cell type fractions in all samples Lollipop of IL17B expression and immune infiltrating cell level correlation result in HPV+ samples
IL17B expression: Low -> High

> Dataset: GSE55546

HeatMap of cell type fractions in all samples Lollipop of IL17B expression and immune infiltrating cell level correlation result in HPV+ samples
IL17B expression: Low -> High

> Dataset: GSE55544

HeatMap of cell type fractions in all samples Lollipop of IL17B expression and immune infiltrating cell level correlation result in HPV+ samples
IL17B expression: Low -> High

> Dataset: GSE55542

HeatMap of cell type fractions in all samples Lollipop of IL17B expression and immune infiltrating cell level correlation result in HPV+ samples
IL17B expression: Low -> High

> Dataset: GSE51993

HeatMap of cell type fractions in all samples Lollipop of IL17B expression and immune infiltrating cell level correlation result in HPV+ samples
IL17B expression: Low -> High

> Dataset: HNSC

HeatMap of cell type fractions in all samples Lollipop of IL17B expression and immune infiltrating cell level correlation result in HPV+ samples
IL17B expression: Low -> High
Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).