HBV Target gene Detail Information

> IGSF10 Gene Search Result


Gene Information
Gene Name IGSF10
Gene ID 285313
Gene Full Name immunoglobulin superfamily member 10
Gene Alias CMF608
Transcripts ENSG00000152580
Virus HBV
Gene Type protein coding
HPA Location Info Vesicles;Predicted to be secreted;
HPA Protein Class Info Disease related genes, Predicted intracellular proteins, Predicted secreted proteins
Uniport_ID Q6WRI0
HGNC ID HGNC:26384
VEGA ID OTTHUMG00000159856
OMIM ID 617351
String ID 9606.ENSP00000282466
Drugbank ID BE0004612
PharmGKB ID PA134900760
Target gene [IGSF10] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1017064 chr3 1 1 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of IGSF10 expression and immune infiltrating cell level correlation result in HBV+ samples
IGSF10 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).