HBV Target gene Detail Information

> IGFN1 Gene Search Result


Gene Information
Gene Name IGFN1
Gene ID 91156
Gene Full Name immunoglobulin-like and fibronectin type III domain containing 1
Gene Alias EEF1A2BP1
Transcripts ENSG00000163395
Virus HBV
Gene Type protein coding
HPA Location Info Midbody ring;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q86VF2
HGNC ID HGNC:24607
VEGA ID OTTHUMG00000035728
OMIM ID 617309
String ID 9606.ENSP00000334714
PharmGKB ID PA162391896
Target gene [IGFN1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1008502 chr1 19 1 20 View
1401551 chr1 19 1 20 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of IGFN1 expression and immune infiltrating cell level correlation result in HBV+ samples
IGFN1 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).