HTLV1 Target gene Detail Information

> IFFO2 Gene Search Result


Gene Information
Gene Name IFFO2
Gene ID 126917
Gene Full Name intermediate filament family orphan 2
Transcripts ENSG00000169991
Virus HTLV1
Gene Type protein coding
HPA Location Info Nucleoplasm;Plasma membrane;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q5TF58
HGNC ID HGNC:27006
VEGA ID OTTHUMG00000002499
String ID 9606.ENSP00000387941
PharmGKB ID PA164720824
Target gene [IFFO2] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6001404 chr1 26 102 321 449 View
6005276 chr1 50 28 13 91 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).