HBV Target gene Detail Information

> ICA1L Gene Search Result


Gene Information
Gene Name ICA1L
Gene ID 130026
Gene Full Name islet cell autoantigen 1 like
Gene Alias ALS2CR14; ALS2CR15
Transcripts ENSG00000163596
Virus HBV
Gene Type protein coding
HPA Location Info Mitochondria;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q8NDH6
HGNC ID HGNC:14442
VEGA ID OTTHUMG00000132856
String ID 9606.ENSP00000478645
PharmGKB ID PA24738
Target gene [ICA1L] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1005112 chr2 25 36 61 View
1012334 chr2 5 2 7 View
1012491 chr2 2 4 6 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of ICA1L expression and immune infiltrating cell level correlation result in HBV+ samples
ICA1L expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).