HTLV1 Target gene Detail Information

> HTR3A Gene Search Result

Gene Information

Gene Name	HTR3A
Gene ID	3359
Gene Full Name	5-hydroxytryptamine receptor 3A
Gene Alias	HTR3; 5HT3R; 5-HT-3; 5-HT3A; 5-HT3R
Transcripts	ENSG00000166736
Virus	HTLV1
Gene Type	protein coding
HPA Location Info
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	FDA approved drug targets, Predicted membrane proteins, Transporters
Uniport_ID	P46098
HGNC ID	HGNC:5297
VEGA ID	OTTHUMG00000160494
OMIM ID	182139
String ID	9606.ENSP00000347754
Drugbank ID	BE0000311
PharmGKB ID	PA29555

Target gene [HTR3A] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
6021979	chr11	5			5	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE55851 (GEO)	Adult T-cell leukemia	21	Normal (3), Asymptomatic carriers (HTLV1+)(6), Adult T-cell Leukemia-lymphoma (HTLV1+)(12)
GSE29312 (GEO)	HTLV-1 associated myelopathy	39	Normal (9), Asymptomatic carriers (HTLV1+)(20), HTLV-1-associated myelopathy (HTLV1+)(10)
GSE29332 (GEO)	HTLV-1 associated myelopathy	35	Normal (8), Asymptomatic carriers (HTLV1+)(17), HTLV-1-associated myelopathy (HTLV1+)(10)

> Dataset: GSE55851
HeatMap of cell type fractions in all samples	Lollipop of HTR3A expression and immune infiltrating cell level correlation result in HTLV1+ samples
HTR3A expression: Low -> High

> Dataset: GSE29312
HeatMap of cell type fractions in all samples	Lollipop of HTR3A expression and immune infiltrating cell level correlation result in HTLV1+ samples
HTR3A expression: Low -> High

> Dataset: GSE29332
HeatMap of cell type fractions in all samples	Lollipop of HTR3A expression and immune infiltrating cell level correlation result in HTLV1+ samples
HTR3A expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).