HBV Target gene Detail Information

> HTR1F Gene Search Result


Gene Information
Gene Name HTR1F
Gene ID 3355
Gene Full Name 5-hydroxytryptamine receptor 1F
Gene Alias 5HT6; MR77; 5-HT1F; HTR1EL; 5-HT-1F
Transcripts ENSG00000179097
Virus HBV
Gene Type protein coding
HPA Location Info
Membrane Info Predicted membrane proteins
HPA Protein Class Info FDA approved drug targets, G-protein coupled receptors, Predicted membrane proteins
Uniport_ID P30939
HGNC ID HGNC:5292
VEGA ID OTTHUMG00000159008
OMIM ID 182134
String ID 9606.ENSP00000322924
Drugbank ID BE0000460; BE0004958
PharmGKB ID PA29553
Target gene [HTR1F] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1017886 chr3 0 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of HTR1F expression and immune infiltrating cell level correlation result in HBV+ samples
HTR1F expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).