HIV Target gene Detail Information

> HSPB11 Gene Search Result


Gene Information
Gene Name HSPB11
Gene ID 51668
Gene Full Name heat shock protein family B (small) member 11
Gene Alias PP25; IFT25; C1orf41; HSPCO34
Transcripts ENSG00000081870
Virus HIV
Gene Type protein coding
HPA Location Info Nucleoplasm;Cytosol;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q9Y547
HGNC ID HGNC:25019
VEGA ID OTTHUMG00000008408
String ID 9606.ENSP00000194214
PharmGKB ID PA162391751
Target gene [HSPB11] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4001128 chr1 65 88 55 208 View
4012834 chr1 2 2 4 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE17372 (GEO) AIDS-associated lymphoma 17 AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372

HeatMap of cell type fractions in all samples Lollipop of HSPB11 expression and immune infiltrating cell level correlation result in HIV+ samples
HSPB11 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).