HIV Target gene Detail Information

> HSPA4 Gene Search Result


Gene Information
Gene Name HSPA4
Gene ID 3308
Gene Full Name heat shock protein family A (Hsp70) member 4
Gene Alias RY; APG-2; HSPH2; hsp70; hsp70RY; HEL-S-5a; HS24/P52
Transcripts ENSG00000170606
Virus HIV
Gene Type protein coding
HPA Location Info Cytosol;Nucleoplasm;
HPA Protein Class Info Cancer-related genes, Plasma proteins, Predicted intracellular proteins
Gene Function Oncogene
Uniport_ID P34932
HGNC ID HGNC:5237
VEGA ID OTTHUMG00000129012
OMIM ID 601113
String ID 9606.ENSP00000302961
Drugbank ID BE0008952
PharmGKB ID PA29503
Target gene [HSPA4] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4009758 chr5 10 1 11 View
4010130 chr5 9 1 10 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE17372 (GEO) AIDS-associated lymphoma 17 AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO) HIV-infected disease 44 HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372

HeatMap of cell type fractions in all samples Lollipop of HSPA4 expression and immune infiltrating cell level correlation result in HIV+ samples
HSPA4 expression: Low -> High

> Dataset: GSE50834

HeatMap of cell type fractions in all samples Lollipop of HSPA4 expression and immune infiltrating cell level correlation result in HIV+ samples
HSPA4 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).