HIV Target gene Detail Information

> HSPA1L Gene Search Result


Gene Information
Gene Name HSPA1L
Gene ID 3305
Gene Full Name heat shock protein family A (Hsp70) member 1 like
Gene Alias HSP70T; hum70t; HSP70-1L; HSP70-HOM
Transcripts ENSG00000236251
Virus HIV
Gene Type protein coding
HPA Location Info Vesicles;Nucleoplasm;
HPA Protein Class Info Cancer-related genes, Plasma proteins, Predicted intracellular proteins
Uniport_ID P34931
HGNC ID HGNC:5234
VEGA ID OTTHUMG00000004929
OMIM ID 140559
String ID 9606.ENSP00000364805
PharmGKB ID PA29500
Target gene [HSPA1L] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4003221 chr6 66 66 View
4005293 chr6 29 5 34 View
4012769 chr6 2 2 4 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE17372 (GEO) AIDS-associated lymphoma 17 AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO) HIV-infected disease 44 HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372

HeatMap of cell type fractions in all samples Lollipop of HSPA1L expression and immune infiltrating cell level correlation result in HIV+ samples
HSPA1L expression: Low -> High

> Dataset: GSE50834

HeatMap of cell type fractions in all samples Lollipop of HSPA1L expression and immune infiltrating cell level correlation result in HIV+ samples
HSPA1L expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).