HTLV1 Target gene Detail Information

> HSP90AB4P Gene Search Result

Gene Information

Gene Name	HSP90AB4P
Gene ID	664618
Gene Alias	HSP90Bd
Virus	HTLV1
Gene Type	pseudo
HGNC ID	HGNC:32538
VEGA ID	OTTHUMG00000191302
PharmGKB ID	PA143485496

Target gene [HSP90AB4P] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
6002617	chr15	58	113	54	225	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE55851 (GEO)	Adult T-cell leukemia	21	Normal (3), Asymptomatic carriers (HTLV1+)(6), Adult T-cell Leukemia-lymphoma (HTLV1+)(12)
GSE29312 (GEO)	HTLV-1 associated myelopathy	39	Normal (9), Asymptomatic carriers (HTLV1+)(20), HTLV-1-associated myelopathy (HTLV1+)(10)
GSE29332 (GEO)	HTLV-1 associated myelopathy	35	Normal (8), Asymptomatic carriers (HTLV1+)(17), HTLV-1-associated myelopathy (HTLV1+)(10)

> Dataset: GSE55851
HeatMap of cell type fractions in all samples	Lollipop of HSP90AB4P expression and immune infiltrating cell level correlation result in HTLV1+ samples
HSP90AB4P expression: Low -> High

> Dataset: GSE29312
HeatMap of cell type fractions in all samples	Lollipop of HSP90AB4P expression and immune infiltrating cell level correlation result in HTLV1+ samples
HSP90AB4P expression: Low -> High

> Dataset: GSE29332
HeatMap of cell type fractions in all samples	Lollipop of HSP90AB4P expression and immune infiltrating cell level correlation result in HTLV1+ samples
HSP90AB4P expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).