HBV Target gene Detail Information

> HSD17B6 Gene Search Result


Gene Information
Gene Name HSD17B6
Gene ID 8630
Gene Full Name hydroxysteroid 17-beta dehydrogenase 6
Gene Alias HSE; RODH; SDR9C6
Transcripts ENSG00000025423
Virus HBV
Gene Type protein coding
HPA Location Info Nucleoplasm;Vesicles;
HPA Protein Class Info Enzymes, Predicted intracellular proteins
Uniport_ID O14756
HGNC ID HGNC:23316
VEGA ID OTTHUMG00000170854
OMIM ID 606623
String ID 9606.ENSP00000451406
PharmGKB ID PA142671671
Target gene [HSD17B6] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1009667 chr12 7 6 2 15 View
1012437 chr12 7 7 View
1012869 chr12 4 2 6 View
1013903 chr12 3 1 4 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of HSD17B6 expression and immune infiltrating cell level correlation result in HBV+ samples
HSD17B6 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).