HTLV1 Target gene Detail Information

> HPGDS Gene Search Result


Gene Information
Gene Name HPGDS
Gene ID 27306
Gene Full Name hematopoietic prostaglandin D synthase
Gene Alias GSTS; PGD2; PGDS; GSTS1; GSTS1-1
Transcripts ENSG00000163106
Virus HTLV1
Gene Type protein coding
HPA Location Info Cytosol;Vesicles;Nucleoplasm;
HPA Protein Class Info Enzymes, Predicted intracellular proteins
Uniport_ID O60760
HGNC ID HGNC:17890
VEGA ID OTTHUMG00000130974
OMIM ID 602598
String ID 9606.ENSP00000295256
Drugbank ID BE0001167; BE0010006
PharmGKB ID PA165664133
Target gene [HPGDS] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6015915 chr4 2 6 5 13 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE55851 (GEO) Adult T-cell leukemia 21 Normal (3), Asymptomatic carriers (HTLV1+)(6), Adult T-cell Leukemia-lymphoma (HTLV1+)(12)

> Dataset: GSE55851

HeatMap of cell type fractions in all samples Lollipop of HPGDS expression and immune infiltrating cell level correlation result in HTLV1+ samples
HPGDS expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).