HIV Target gene Detail Information

> HNRNPA1 Gene Search Result

Gene Information

Gene Name	HNRNPA1
Gene ID	3178
Gene Full Name	heterogeneous nuclear ribonucleoprotein A1
Gene Alias	UP 1; ALS19; ALS20; HNRPA1; IBMPFD3; HNRPA1L3; hnRNP A1; hnRNP-A1
Transcripts	ENSG00000135486
Virus	HIV
Gene Type	protein coding
HPA Location Info	Nucleoplasm;
HPA Protein Class Info	Disease related genes, Plasma proteins, Predicted intracellular proteins
Gene Function	Oncogene
Uniport_ID	P09651
HGNC ID	HGNC:5031
VEGA ID	OTTHUMG00000169702
OMIM ID	164017
String ID	9606.ENSP00000341826
PharmGKB ID	PA162391113

Target gene [HNRNPA1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4001809	chr12	74	41	15	130	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of HNRNPA1 expression and immune infiltrating cell level correlation result in HIV+ samples
HNRNPA1 expression: Low -> High

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of HNRNPA1 expression and immune infiltrating cell level correlation result in HIV+ samples
HNRNPA1 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).