HPV Target gene Detail Information

> HMGN5 Gene Search Result


Gene Information
Gene Name HMGN5
Gene ID 79366
Gene Full Name high mobility group nucleosome binding domain 5
Gene Alias NSBP1; NBP-45
Transcripts ENSG00000198157
Virus HPV
Gene Type protein coding
HPA Location Info Nucleoplasm;Mitochondria;
HPA Protein Class Info Plasma proteins, Predicted intracellular proteins
Gene Function Oncogene
Uniport_ID P82970
HGNC ID HGNC:8013
VEGA ID OTTHUMG00000021911
OMIM ID 300385
String ID 9606.ENSP00000350848
PharmGKB ID PA31789
Target gene [HMGN5] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5002314 chrX 7 5 12 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).