HTLV1 Target gene Detail Information

> HERC2 Gene Search Result


Gene Information
Gene Name HERC2
Gene ID 8924
Gene Full Name HECT and RLD domain containing E3 ubiquitin protein ligase 2
Gene Alias jdf2; p528; MRT38; SHEP1; D15F37S1
Transcripts ENSG00000277278
Virus HTLV1
Gene Type protein coding
HPA Location Info Cytosol;Plasma membrane;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Disease related genes, Enzymes, Potential drug targets, Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID O95714
HGNC ID HGNC:4868
VEGA ID OTTHUMG00000174897
OMIM ID 605837
String ID 9606.ENSP00000261609
PharmGKB ID PA29243
Target gene [HERC2] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6001944 chr15 311 311 View
6004485 chr15 114 114 View
6007260 chr15 51 6 1 58 View
6020994 chr15 5 1 6 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).