HIV Target gene Detail Information

> HELQ Gene Search Result

Gene Information

Gene Name	HELQ
Gene ID	113510
Gene Full Name	helicase, POLQ like
Gene Alias	HEL308
Transcripts	ENSG00000163312
Virus	HIV
Gene Type	protein coding
HPA Location Info	Nuclear speckles;Nucleoplasm;
HPA Protein Class Info	Enzymes, Predicted intracellular proteins
Uniport_ID	Q8TDG4
HGNC ID	HGNC:18536
VEGA ID	OTTHUMG00000130423
OMIM ID	606769
String ID	9606.ENSP00000295488
PharmGKB ID	PA164720529

Target gene [HELQ] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4006199	chr4	22	4		26	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of HELQ expression and immune infiltrating cell level correlation result in HIV+ samples
HELQ expression: Low -> High

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of HELQ expression and immune infiltrating cell level correlation result in HIV+ samples
HELQ expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).