HIV Target gene Detail Information

> HECTD4 Gene Search Result


Gene Information
Gene Name HECTD4
Gene ID 283450
Gene Full Name HECT domain E3 ubiquitin protein ligase 4
Gene Alias HEEL; POTAGE; C12ord51; C12orf51
Transcripts ENSG00000173064
Virus HIV
Gene Type protein coding
HPA Location Info Vesicles;Nucleoplasm;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted intracellular proteins, Predicted membrane proteins
HGNC ID HGNC:26611
VEGA ID OTTHUMG00000150719
String ID 9606.ENSP00000449784
PharmGKB ID PA143485380
Target gene [HECTD4] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4008808 chr12 11 2 1 14 View
4012880 chr12 3 1 4 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE17372 (GEO) AIDS-associated lymphoma 17 AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372

HeatMap of cell type fractions in all samples Lollipop of HECTD4 expression and immune infiltrating cell level correlation result in HIV+ samples
HECTD4 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).