HBV Target gene Detail Information

> GZF1 Gene Search Result


Gene Information
Gene Name GZF1
Gene ID 64412
Gene Full Name GDNF inducible zinc finger protein 1
Gene Alias JLSM; ZBTB23; ZNF336
Transcripts ENSG00000125812
Virus HBV
Gene Type protein coding
HPA Location Info Nucleoli;Nucleoplasm;
HPA Protein Class Info Disease related genes, Predicted intracellular proteins, Transcription factors
Uniport_ID Q9H116
HGNC ID HGNC:15808
VEGA ID OTTHUMG00000032069
OMIM ID 613842
String ID 9606.ENSP00000338290
PharmGKB ID PA162390561
Target gene [GZF1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1003474 chr20 129 1 1 131 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of GZF1 expression and immune infiltrating cell level correlation result in HBV+ samples
GZF1 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).