HIV Target gene Detail Information

> GTF3C3 Gene Search Result

Gene Information

Gene Name	GTF3C3
Gene ID	9330
Gene Full Name	general transcription factor IIIC subunit 3
Gene Alias	TFIIIC102; TFIIICgamma; TFiiiC2-102
Transcripts	ENSG00000119041
Virus	HIV
Gene Type	protein coding
HPA Location Info	Nuclear membrane;Nucleoplasm;
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID	Q9Y5Q9
HGNC ID	HGNC:4666
VEGA ID	OTTHUMG00000154633
OMIM ID	604888
String ID	9606.ENSP00000263956
PharmGKB ID	PA29054

Target gene [GTF3C3] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4006694	chr2	23			23	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of GTF3C3 expression and immune infiltrating cell level correlation result in HIV+ samples
GTF3C3 expression: Low -> High

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of GTF3C3 expression and immune infiltrating cell level correlation result in HIV+ samples
GTF3C3 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).