Home
Virus
Gene
Disease
Dataset
Download
Help
 
HBV Target gene Detail Information

> GRIP1 Gene Search Result


Gene Information
Gene Name GRIP1
Gene ID 23426
Gene Full Name glutamate receptor interacting protein 1
Gene Alias GRIP; FRASRS3
Transcripts ENSG00000155974
Virus HBV
Gene Type protein coding
HPA Location Info
HPA Protein Class Info Disease related genes, Predicted intracellular proteins
Uniport_ID Q9Y3R0
HGNC ID HGNC:18708
VEGA ID OTTHUMG00000169019
OMIM ID 604597
String ID 9606.ENSP00000381098
PharmGKB ID PA38652
Target gene [GRIP1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1005343 chr12 49 2 5 56 View
1009543 chr12 15 15 View
1010977 chr12 6 3 1 10 View
1011288 chr12 9 9 View
1014145 chr12 1 3 4 View
1018369 chr12 0 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE114783 (GEO) Chronic HBV (CHB) infection 36 Chronic hepatitis B patients (HBV+)(10),Hepatocellular carcinoma (HBV+)(10),Liver cirrhosis(HBV+)(10),Normal(3),HBV carriers (3)
GSE114783 (GEO) Hepatocellular carcinoma 36 Chronic hepatitis B patients (HBV+)(10),Hepatocellular carcinoma (HBV+)(10),Liver cirrhosis(HBV+)(10),Normal(3),HBV carriers (3)
GSE114783 (GEO) Liver cirrhosis 36 Chronic hepatitis B patients (HBV+)(10),Hepatocellular carcinoma (HBV+)(10),Liver cirrhosis(HBV+)(10),Normal(3),HBV carriers (3)
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: GSE114783

HeatMap of cell type fractions in all samples Lollipop of GRIP1 expression and immune infiltrating cell level correlation result in HBV+ Chronic HBV (CHB) infection samples
GRIP1 expression: Low -> High
Lollipop of GRIP1 expression and immune infiltrating cell level correlation result in HBV+ Liver cirrhosis samples Lollipop of GRIP1 expression and immune infiltrating cell level correlation result in HBV+ Hepatocellular carcinoma samples

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of GRIP1 expression and immune infiltrating cell level correlation result in HBV+ samples
GRIP1 expression: Low -> High
Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).