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HBV Target gene Detail Information

> GRIN3A Gene Search Result


Gene Information
Gene Name GRIN3A
Gene ID 116443
Gene Full Name glutamate ionotropic receptor NMDA type subunit 3A
Gene Alias NR3A; GluN3A; NMDAR-L
Transcripts ENSG00000198785
Virus HBV
Gene Type protein coding
HPA Location Info
Membrane Info Predicted membrane proteins
HPA Protein Class Info FDA approved drug targets, Predicted membrane proteins
Uniport_ID Q8TCU5
HGNC ID HGNC:16767
VEGA ID OTTHUMG00000020387
OMIM ID 606650
String ID 9606.ENSP00000355155
Drugbank ID BE0000641
PharmGKB ID PA28983
Target gene [GRIN3A] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1003431 chr9 12 78 44 134 View
1003432 chr9 12 78 44 134 View
1006815 chr9 13 19 2 34 View
1006972 chr9 11 19 2 32 View
1010540 chr9 8 4 12 View
1010558 chr9 8 4 12 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of GRIN3A expression and immune infiltrating cell level correlation result in HBV+ samples
GRIN3A expression: Low -> High
Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).