HBV Target gene Detail Information

> GRIK3 Gene Search Result


Gene Information
Gene Name GRIK3
Gene ID 2899
Gene Full Name glutamate ionotropic receptor kainate type subunit 3
Gene Alias EAA5; GLR7; GLUR7; GluK3; GluR7a
Transcripts ENSG00000163873
Virus HBV
Gene Type protein coding
HPA Location Info
Membrane Info Predicted membrane proteins
HPA Protein Class Info Plasma proteins, Predicted membrane proteins
Uniport_ID Q13003
HGNC ID HGNC:4581
VEGA ID OTTHUMG00000004189
OMIM ID 138243
String ID 9606.ENSP00000362183
Drugbank ID BE0000832; BE0009793
PharmGKB ID PA28975
Target gene [GRIK3] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1010097 chr1 9 4 13 View
1014631 chr1 3 3 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of GRIK3 expression and immune infiltrating cell level correlation result in HBV+ samples
GRIK3 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).