HBV Target gene Detail Information

> GRIA1 Gene Search Result


Gene Information
Gene Name GRIA1
Gene ID 2890
Gene Full Name glutamate ionotropic receptor AMPA type subunit 1
Gene Alias GLUH1; GLUR1; GLURA; GluA1; HBGR1
Transcripts ENSG00000155511
Virus HBV
Gene Type protein coding
HPA Location Info
Membrane Info Predicted membrane proteins
HPA Protein Class Info FDA approved drug targets, Plasma proteins, Predicted membrane proteins
Uniport_ID P42261
HGNC ID HGNC:4571
VEGA ID OTTHUMG00000130148
OMIM ID 138248
String ID 9606.ENSP00000428994
Drugbank ID BE0000640
PharmGKB ID PA28966
Target gene [GRIA1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1009786 chr5 14 14 View
1009787 chr5 14 14 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of GRIA1 expression and immune infiltrating cell level correlation result in HBV+ samples
GRIA1 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).